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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
BRCA rs10739077 chr9:5857408 A/G 1.52E-5 1028 19.12 24.6 21.17 KM Plot
BRCA rs10881682 chr10:91583353 C/T 5.5E-7 1014 21.43 23.25 5.33 KM Plot
BRCA rs10889829 chr1:41543546 G/C 1.75E-5 1023 21.8 20.67 10.75 KM Plot
BRCA rs11025902 chr11:21094710 A/G 1.91E-7 1028 21.57 22.4 6.1 KM Plot
BRCA rs11047758 chr12:25170444 A/G 3.44E-6 1020 21.43 24.83 23.77 KM Plot
BRCA rs11047759 chr12:25170545 T/C 3.44E-6 1020 21.43 24.83 23.77 KM Plot
BRCA rs11047760 chr12:25170584 A/G 3.44E-6 1020 21.43 24.83 23.77 KM Plot
BRCA rs11167296 chr20:30516655 A/T 7.99E-15 1028 21.17 24.43 9.85 KM Plot
BRCA rs111931528 chr6:43159128 C/G 1.79E-13 1015 21.7 21.93 10.73 KM Plot
BRCA rs112084274 chr20:30492046 CT/C 1.02E-14 1011 21.43 23.25 8.5 KM Plot
BRCA rs112177478 chr6:43157222 C/T 1.86E-13 1015 21.68 21.42 10.73 KM Plot
BRCA rs11224685 chr11:101143272 A/G 7.75E-6 1028 22 18.95 25 KM Plot
BRCA rs112419947 chr20:2754493 G/A 1.33E-5 1022 22.17 20.73 12.32 KM Plot
BRCA rs11254085 chr10:16610995 G/A 2.98E-6 1017 23.07 19.17 15.53 KM Plot
BRCA rs112679761 chr9:94125204 A/G 1.44E-7 1024 22.15 19.17 9.15 KM Plot